CDS

Accession Number TCMCG073C09095
gbkey CDS
Protein Id XP_010532760.1
Location complement(join(1125050..1125306,1125414..1125546,1125635..1126162,1126318..1126551,1126893..1127172,1127255..1129062,1129143..1129208,1129434..1129559,1129824..1130213,1130307..1130488,1130569..1130705,1130788..1131003,1131519..1131766,1131976..1132389,1132480..1132741,1132830..1132970,1133118..1133298,1133513..1133852,1134010..1134253,1134351..1134525,1134834..1135159,1135255..1135329,1135406..1135610,1135730..1135933,1136115..1136288,1136385..1136491,1136857..1136930,1137019..1137097,1137726..1137770,1138140..1138297,1138849..1138977,1139623..1139691))
Gene LOC104808700
GeneID 104808700
Organism Tarenaya hassleriana

Protein

Length 2668aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA268022
db_source XM_010534458.1
Definition PREDICTED: small subunit processome component 20 homolog isoform X1 [Tarenaya hassleriana]

EGGNOG-MAPPER Annotation

COG_category V
Description Down-regulated in metastasis
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14772        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGGCGACTTCGGCACACGCGATGGCAGTGAAATCGCTCAACAGTTCCGGGGGTCGTAAAAGATTTTCGTTCAAGACCTTCTCGGATAGAATTGGTGAGATTGATATCGTTACCAATGTCTTTCGGAGCTTGGATAAAGTCAAGGCTGAGCCTTCAGAGGGATCTTCATTTTTCAAGGATAGCCTCGTAGAATGGAGGGAACTGAATACAGCGGAGGACTTCATTTCATTTTATGAGGAAATATTTCCATTTGTTCAGACTTTGCCCTTGGTTCTTTTGCATAAAGAATTGATCTTCTCAGAACTTGAATCTAGATTACAGTTGAAATCAAGATTATCTCTTGAGCCTATTCTCAGGTTGATTGCTGTTTTATCGAGAGACCTCTTAGACGACTTCCTGCCCTTCCTTCCCAGAATTGTTAAGTCCTTGGTGTCTCTCCTTGAAAGTGGTGGTGAGAAAGAGCCAGAGATTGTTGAACAGATATTCACGTCCTGGTCTTATATTATGATGTATCTGCAGAAGTATCTCATATGCAATATTGAAGGTCTCCTCAGGGATACACTAGAATTGAGGTATTATCCCAAGGAATATATCAAGGAATTCATGTCAGAGTCAATTTCTTTTCTGTTGAGGAATGCAGGGGATGAACAACATGAGAAAGGGATCAGGAGAATCCTGTCCGAAGTTGCTAATCCACTGAGAAAGTCTGGAGGAGTTGCTTTGCTATATTATGTTATGAGGGGTACTTCAACAAATCTCCATTCAAAAGTTGGGAGGGCGTTGAGGTTCTTACTAAAAGATTCAACATTTTCTTTCTGTGATAAATTTGATAAAGGTTCTAGAACAGCGGTGGAAGTTGTGAGTTCTACCTTACAAAGATTATGTGAGGATTTTGAAGCTAGTGAATTAAACATAATGTGGAAGTGCTTGTATTCAGAGATAAACGAATCAGCTGAGATCAAGAATTTTATTCATTTGAGCCGATTGTTGGCAGTGCTTACTTCAGTTGTTCGGATTAATAAAGGTCGCAAAACGTCTGATAACCAGGCAATGAAACTTGTGAGCTGCCTCATGCCAACTATAATCGAAGCTTCTAAGAGGATGGTGGAAAATGATAATTTATCTGACCTCATAGATGAGGTTCTGCAGCTGATGTTAGGCATCATTGACAGTCTTCAGTTGCCCAGTGAAGTGGATAATGTTGCGATGCAATGGTCTCCTGTATTTGCTTTTAAGAGTTCAAGTGTGCTGACTTTTATACGGGAGTTGCTGCAAAAGGACCATCTCATTGTCAAGGCCTTCACTACTAATATATTAAGTGCAATAAACAATATGGTGGAGTCTTCCAAGTCTTCTGAGGAGATTGTTTATTTGTTGCTGTTACTGGCTGAGCGACAAGAAGCAACTCCTTACATTACGGAGATAGATGAGAAAATATGTGGGAAAATTCATGAGTTCCTCGAAAATAATATGAAGCAGGCTGTACAAGATATAGTGCAGGAGAATATCATGTCCACCCAAATTGATGAGGGCAAGTTGGCTACATTCTGGGGAGTCATCAACTCCTACCATTATTTTAAAGTGGATTCGTCTTTACTGGTTAATCTTGTGCATGCTCTCAGAGAACATTTGCCTATCTCAGGTGGTACCATCACAAGTGCCCATGAAATGAAATGGCAGAGCTTATTTGGTGCTGCTTTGAGCTCATACTACAAATCTCGAAAAATCAATTGTGTTGATGTCAGTGAAGCTTTATCTTTTGCAAAAAATTACAACTCATGTGTACAAGTATTGTCTGCTGTCGCCGACTATTTGGATGGGCTTGTGGTAGCAAATGGTAATCAGAGTAAGGAATATCATGTAGAGCTTCGGGCGGAGAAGGCTGTGGAGGCATTTAAAATACTCTCTGAAAATCTGCGCAATTCTAACAAAGACATCCGTGTTATGACTCTAAGGATTTTGTGCCATTTTGAAGGACTGAGCTCTGAGCCTGCTTTTGATGAGCAACCTCCAAAAAAGAAAATGAAAACTGAAGAGACTCAAGCATCTCTTCCTAAGAGCAGCGTTCTTCAGTCATTACTTTCAATTGAAGAGACCCCTCTCACGATTACAACCAGCCGGAAGCTAGTCAATTTGATCGCTACAATACAGATGGATCTCTCTGCCGGCAGGATACATGAGGCATATGTGCCACTTGTATTTAATGGGATGATGGGAGTATTTCATAATCGGTTTAGTTATCTATGGGATCAGACATCGGAGTGTCTTGCAGTTCTTTTGAAGAAGCATACTGGAGTCATTTGGGATGAGTTGGTTTGTTATTTTGGCCAATGCCAAGTGAAATTTGGAACTCGCGTTATCCTGAATGAGAATGAGAACCACAGCATGTTAGACAAGAGTACAGATCTGGTTGTCCATTTCAGTTCTTTTCTATATCGGCCATCAGATAGTACACCAAGTGCAACAGTTGTATCTTTGTTGCTCCGAACCTTACAAAAGGTTCCTTTTGTTGCTGAATCTCGGTCGTCGGATATAATCCCTTTGTTTTTGGAGTTTCTGGGATACAACAGAGAAGATTTGGTGAGTGTTGGGTTATTTAATCGCGGGGCTTGCAAAGGAAAGGAGTGGAAAGGAGCTCTTAAAGAGTGGTTATCTCTGTTGAAGTTGATGCGGAATCCAAGGGCCTTCCACCCCAATCAATTTGTAAAAGATGTTCTGCAGTATAGGCTTCTGGATGATAATGATGCTGAAATTCAAATGAATGCGCTTGAATGCCTGTCACTGTGGAAGGATGACTTCGTACTCCCATATTATCAAAATTTAAAGAATTTGATTAGTTCCAAAGACCTGAGGGAGGAGCTCACAACTTGGAGCTTGTCCAAACAATCAAACTGTGTTGAAGAAGCTCACAGAGTTCATCTTGTTTCTCTTGTAATTCGCATATTGATGCCGAAAGTCAGAAAATTGAAAACATTGGCTTCCCGGAAGCATACGAGTGTTCATCACCGGAAGGCGGTTCTTTGTTTTATAGCTCAGCTGGATGTTTGCGAGCTCACTATCTTCTTTGCATTGTTGATAAAGCCTTTGAATATCACGTCAGAGGGAACAATGGACTTGTTTTGGACATCACCTGATAGTTACTTGGATCACTTCCAAATGTCGAAATATCTGAAGTATTTCAGTGTTGAATCCATATCATCCTTATCTTGGAAGAAGAAATTCGGTTTTCTTCATGTCATCCAACATACCCTTGAAGTCTTTGATGAATTCCACATTCGTCCGTTTCTGGATTTCTTGATGGGATGTGTGGTCCGGCTACTGGTAAACTCTACTGCAAGAAATGCTACTGATGTCTTACCAACCTCAGATGAGAAAGAGAACTCGACCTTGTATTATGACCAGACTGGTTGTAGATCTTCGAAGCAGTTCAAAGAGTTGAGGTCTTTGTGTCTGAAGATTATTGCCCTTGTTCTCGATAAGCACGAGGATTGTGATCTCGGCTCTGAGTTCTGGGACATCTTCTTTGCAGCAGTGAACCCTTTAATTAAAAGTTTTAAGCAGGAGGGTTCTAGTAGTGAGAAACCAAGCTCACTGTTCTCATGCTTCTTGTCTATGAGTAGAAGCCACAATCTTGTTACTCTCTTATGTAGGGAAAATTCTCTTGTTCCAGACATTTTTTCTATTCTAACAGTCGCGACAGCTTCAGAAGCTGTGAAGTCGTCCGTCTTGAAATTTGTAGAGAATCTGCTCAGTCTTGATAGAGAGTTGGGTGACGAAGACAATATGGTCAAAACAATCTTAGTTCCAAACGCTGGGACATTGATCCATAGCTTACATTCACTTTTCCTTGGTGATACTTCTAAAAGAAATTCTGTCAGATATCATGGTGAGAGAGAGATTACGATTCTCGAACTATTGTCAAAGTACATCCTGGATCAGTCACATGCAGAGAAATATCTAGACGTGTTGCTGTCTTTCTTGGCTAAAAGTGTGAAAGATTCTGAAATCCGTCGTAGGGCTTTGCAAACCGTTCAGTATATCATACCTGCACTTGGAACTGAGAGTATGAGCAAGATTCTTAACATAATCTCTCCACTTCTCATTGATTCTGACCTTGACGCTAGGTTATGCATCTGTGAGCTTCTCAAAGCTCTTGTAGAAATTGATTCTTCTCTGGATATCGTGGCAAATCTCATCTGCGATTTAAACGCAACCTCAGCAATGGAAGTTGATGGCCTTGACTATGACAAAATAGCTAACACATATGCTGAGATTGATGTTGATTTCTTTCAGAGATCTTCAGAACAGCACACATTGATCCTACTCTCGCAGAGTGTATACAACATGTCATCGAAAGAACACACACTAAGGGATGGTGCCTATGGTCTCTTGCGTACTTTTGTTGCATTTTCAGCCTCAGTACTTCGCCAAAAGGCTTCAGATTCTCCTGACATCAGCAAAGAAGTTGAAAAGCCTAATGGAAATTGGACGAAAGCTCATGTACTGCGTACCATAAAAAAGTTTCTTTTGAAACACATGGGTCGCTCTATGATCAGAGGAGGTTCTATAAGAAAGGAGTGGATTCATCTGATACGTGAAATGGTGATAGAACTTCCAGATGCTGGAAACCTTGCTTCATTTAAAGCTTTATGTTCTGAAAATCCAGAAGTAGATTTTTTTAAGAACATTGTTCACCTTCAGAAACATCGTATAGCAAAGGCACTCATGCGCTTTGCAAATGTGATCAGTACCAACAGCCTACATGAGGGAGTAGTAACAAAACTTTTTGTCCCGCTTTTTTTCAACATGCTGCTTGAGGGGCAAGATGGAAAAGATGATAATGTTCGAACTGCATGTGTGGCAGTCCTTGCGTCTATCTCTGCCCATATGAGATGGGAGTCATACTATGCTCTATTGTCTCGGAGTTTCCGTGAGATGAGCAAGCATAGTGATAAGACAAAAATTCTATTGCGGCTTATATGCTCGATCTTGGATAAGTTTCATTTTGCAGAAGGTGGTAACAGCCATGAAGCTGAAGAGTGTTCCTTCGATAGTTTGAATGATGAGACATGTTTGGAGATTAGCACTCGCCTTCAGAAAACTGTGTTTCCGAAGATACAGAAGTTGATGAATTCCGATTCTGATAAAGTTAATGTTAACATCAACTTGGCTGCAGTGAAGGTTCTAAAGCTGCTCCCAAAAGACATAATGAATGCGCAGCTTCCTGCTATACTTCACAGAATTTGCAGTTTTTTGAAGAATCGGTTGGAGAGTACACGTGATGAAGCCAGATTGGCTTTGGCTGCTTGTCTGAAAGAACTTGGGCTGGAATACTTGCAGTCTGTCATCAAAATTTTGCGTGCTATCCTAAAACGAGGGTTTGAGTTGCATGTGCTGGGATATACGGTAAATTTTATATTATCAAAGTGCCTGTCAAATCCTCTATGTGGGAAGCTGGATGATTGCTTGGAGGATCTTCTTGCTGTGGTGGAAACTGATATCTTTGGAGATGTTGCTGAACAAAAAGAGGTGGAAAAAATTGCATCGAAAATGAAGGAAACAAGAAAATGCAAGTCATATGAAACTCTGAAACTGATTGCTCAAAACGTTACATTCAAAAGCCACGTCAGGAAGTTACTCTCTCTTGTCACTGGCCAGCTGCAAAGGCATTTAACTCCGAAACTGAAATCAAAGCTGGAGAACATGTTAGATCATATTGCAGCTGGTATCGAAGGCAATCCTTCCGTTGTTGAAATAGAACTTTTTCCCTTTGTATATGAAAATCTCGTCGATGATAGCATTAACAGAGAAAAGGGCACTGTGGATCAGTTCTTCTCTCCAGCCTCGAAGAAAGAAAGGAAAGATCTACAAAAGAAAGCTGGCTCTGCTGGATTTGTTTCTGGAACCAAGTCATGTTCCCAGCTTATTACAGTATTTGCTTTGGGCTTGTTGCACAATAGAGTGAAGAATACGAACCCGAACGAATGTACCCAGGAGTTTTTGGAGATGCTGGTCCCATTTGTCGAAAAACTCACTGGGTGTTTGAGTTCAAAGTATGAAGATGTTGTATCTTCAACTCTTAGATGTTTTACTGCATTGGTAAGGTTTCTGCCTTACCTCATGTCCTGCAGTATTGAAGGTGATAAAGTAAAAATAAAACTGTCGACCATTGATAAAGTGAAAATAGCACTGTTGACCATTGCCCAGTCTGCAGTGGATTGTAGTAGTCCTCTGGTGCAGTCCTGCCTCAAGTTGTTGACAGTTCTTCTCCGCACTGAGTTGATCACTTTGTCATCTGAGCAATTGCGGATGTTGTTTCAATTCCCGATGTTTGTTGATCTGGAAACGGACCCTTCGTTTGTTGCTCTTTCGCTCCTCAAGGTAATTGTGAAAAGGGAGCATGTTGTTCCAGAGATATATGATATCGCTATACGGGTTGGAGAGTTAATGGTGAAAAGTCAGCTGGAATCGATCCGTAAGAAATGTAGCCAGATACTCTTGCAATTTTTGGTCCGATATAAATTCTCTGAGAATCGCCTGCAACAACATGTGGACTTCTTGCTTGCAAATTTGAGGTATGAACATCCAAGTGGAAGAGAAGCTGTGCTTGAAATGCTTCACGCTGTCATCAAGAAGTTATCAGAGCCTCGTCTCAAGAAGCAATCGATGGCATTATTTGTACATCTTGTTGGATGTTTGGCCAACGATGGCGATAGCAACGTTCGGTCTCAAACTGGAACTGTAATCAAATTCCTGATAGGACACATCACCGAAGATCAAGTCAGTCCCATTCTGTCATGCTGTCTATCTTGGTATTCTAGCAATAAGCAACAACTACAGGCTGCAGCTGCACAGGTACTTGGATTTTTTATCGAGGTCAAGAAAAAAAGCTTCCAGGAGCATATAAATACTGTACTGCAAAAGGCCGAAACAATTCTGAAGTCTGCTGTCTCTTCTGCCTCCCAACAGACGCAAGATACCGTGGATGTATCCAGCATTCCTTTCTGGAAGGAAGCGTATTATTCACTGGTTATGATAGAGAAGATGCTCCATCAATTTCCGGGTTTATGTTTTGGAGACGATACAAAGGATATTTGGAGTATGGTCTTTGAGTTGTTGCAGCATCCACATGCATGGTTGCGAAACATATCATGCCGATTTCTCAACTTTTATTTCAATGCATTAGCTAAGACAAAAAGATCGAGCTCTCGAGAATTAGCGGTTGATTCTCTTCTCACAAGTCCAACTAGACTTTTCAAAGTGGCTGTTTCTCTATGCATCCAGTTAAAGGAACAACCCACCACTGGCGATACCAGTAACGTTGATATCCTTACAGCAAACATCGTTTTTGCGGTCTCTTCCCTTCATTCTCTGACGGGTCAAGCCGATACAAATCGTCTGGAAACTTTGTCTGCCCTCGAAGAAGATGAACGAAACTTGTTCCTTGAAGCTTTCGAACTGCTTGGTTCGAGGAAAGAGAGATCAAATTTTCTCGCTCTTACCTCAGGGGAACAAGCTGGGGAAAGTGAAGATGGTGGAAATATTCCGAGAAAAGTATTTGTTGGAAGTTTGCTCAAGAAAATGGGGAAGCTTGCTCTTGAAATGGAACTCATTCAGACGAAAACGGTTTTCAATGTCTATAAAAGCTTTACCTCGCAAATGAATCAAGAAGAATGCTGCCTATATGCCTCAATAATACTTCTCCCGCTGTACAAAATTTGCGAAGGGTTTGCCGGAAAAGTCATCTCTGATGAGTTGAAACAGCAAGCGGAAGAGTTAAAGGACAGTTTACGAGACACTTTGGGCATGAAGATCTTTGAAGAGAGATATCGTGAAATCAGGGAGAGGTTGAAGAAGAAGCGGGAGAATAGGAAACGAGAAGAGAAGGTAATGGCGGTGGTTAATCCGGTGAGGAATGCCAAGAGGAAACTCAGGTTAGCTGCCAAGAACCGCGAAAACAAGAGGAGGAGAACCATGAGCTTCAAAATGGCTAGATTCGTTCGTTGA
Protein:  
MATSAHAMAVKSLNSSGGRKRFSFKTFSDRIGEIDIVTNVFRSLDKVKAEPSEGSSFFKDSLVEWRELNTAEDFISFYEEIFPFVQTLPLVLLHKELIFSELESRLQLKSRLSLEPILRLIAVLSRDLLDDFLPFLPRIVKSLVSLLESGGEKEPEIVEQIFTSWSYIMMYLQKYLICNIEGLLRDTLELRYYPKEYIKEFMSESISFLLRNAGDEQHEKGIRRILSEVANPLRKSGGVALLYYVMRGTSTNLHSKVGRALRFLLKDSTFSFCDKFDKGSRTAVEVVSSTLQRLCEDFEASELNIMWKCLYSEINESAEIKNFIHLSRLLAVLTSVVRINKGRKTSDNQAMKLVSCLMPTIIEASKRMVENDNLSDLIDEVLQLMLGIIDSLQLPSEVDNVAMQWSPVFAFKSSSVLTFIRELLQKDHLIVKAFTTNILSAINNMVESSKSSEEIVYLLLLLAERQEATPYITEIDEKICGKIHEFLENNMKQAVQDIVQENIMSTQIDEGKLATFWGVINSYHYFKVDSSLLVNLVHALREHLPISGGTITSAHEMKWQSLFGAALSSYYKSRKINCVDVSEALSFAKNYNSCVQVLSAVADYLDGLVVANGNQSKEYHVELRAEKAVEAFKILSENLRNSNKDIRVMTLRILCHFEGLSSEPAFDEQPPKKKMKTEETQASLPKSSVLQSLLSIEETPLTITTSRKLVNLIATIQMDLSAGRIHEAYVPLVFNGMMGVFHNRFSYLWDQTSECLAVLLKKHTGVIWDELVCYFGQCQVKFGTRVILNENENHSMLDKSTDLVVHFSSFLYRPSDSTPSATVVSLLLRTLQKVPFVAESRSSDIIPLFLEFLGYNREDLVSVGLFNRGACKGKEWKGALKEWLSLLKLMRNPRAFHPNQFVKDVLQYRLLDDNDAEIQMNALECLSLWKDDFVLPYYQNLKNLISSKDLREELTTWSLSKQSNCVEEAHRVHLVSLVIRILMPKVRKLKTLASRKHTSVHHRKAVLCFIAQLDVCELTIFFALLIKPLNITSEGTMDLFWTSPDSYLDHFQMSKYLKYFSVESISSLSWKKKFGFLHVIQHTLEVFDEFHIRPFLDFLMGCVVRLLVNSTARNATDVLPTSDEKENSTLYYDQTGCRSSKQFKELRSLCLKIIALVLDKHEDCDLGSEFWDIFFAAVNPLIKSFKQEGSSSEKPSSLFSCFLSMSRSHNLVTLLCRENSLVPDIFSILTVATASEAVKSSVLKFVENLLSLDRELGDEDNMVKTILVPNAGTLIHSLHSLFLGDTSKRNSVRYHGEREITILELLSKYILDQSHAEKYLDVLLSFLAKSVKDSEIRRRALQTVQYIIPALGTESMSKILNIISPLLIDSDLDARLCICELLKALVEIDSSLDIVANLICDLNATSAMEVDGLDYDKIANTYAEIDVDFFQRSSEQHTLILLSQSVYNMSSKEHTLRDGAYGLLRTFVAFSASVLRQKASDSPDISKEVEKPNGNWTKAHVLRTIKKFLLKHMGRSMIRGGSIRKEWIHLIREMVIELPDAGNLASFKALCSENPEVDFFKNIVHLQKHRIAKALMRFANVISTNSLHEGVVTKLFVPLFFNMLLEGQDGKDDNVRTACVAVLASISAHMRWESYYALLSRSFREMSKHSDKTKILLRLICSILDKFHFAEGGNSHEAEECSFDSLNDETCLEISTRLQKTVFPKIQKLMNSDSDKVNVNINLAAVKVLKLLPKDIMNAQLPAILHRICSFLKNRLESTRDEARLALAACLKELGLEYLQSVIKILRAILKRGFELHVLGYTVNFILSKCLSNPLCGKLDDCLEDLLAVVETDIFGDVAEQKEVEKIASKMKETRKCKSYETLKLIAQNVTFKSHVRKLLSLVTGQLQRHLTPKLKSKLENMLDHIAAGIEGNPSVVEIELFPFVYENLVDDSINREKGTVDQFFSPASKKERKDLQKKAGSAGFVSGTKSCSQLITVFALGLLHNRVKNTNPNECTQEFLEMLVPFVEKLTGCLSSKYEDVVSSTLRCFTALVRFLPYLMSCSIEGDKVKIKLSTIDKVKIALLTIAQSAVDCSSPLVQSCLKLLTVLLRTELITLSSEQLRMLFQFPMFVDLETDPSFVALSLLKVIVKREHVVPEIYDIAIRVGELMVKSQLESIRKKCSQILLQFLVRYKFSENRLQQHVDFLLANLRYEHPSGREAVLEMLHAVIKKLSEPRLKKQSMALFVHLVGCLANDGDSNVRSQTGTVIKFLIGHITEDQVSPILSCCLSWYSSNKQQLQAAAAQVLGFFIEVKKKSFQEHINTVLQKAETILKSAVSSASQQTQDTVDVSSIPFWKEAYYSLVMIEKMLHQFPGLCFGDDTKDIWSMVFELLQHPHAWLRNISCRFLNFYFNALAKTKRSSSRELAVDSLLTSPTRLFKVAVSLCIQLKEQPTTGDTSNVDILTANIVFAVSSLHSLTGQADTNRLETLSALEEDERNLFLEAFELLGSRKERSNFLALTSGEQAGESEDGGNIPRKVFVGSLLKKMGKLALEMELIQTKTVFNVYKSFTSQMNQEECCLYASIILLPLYKICEGFAGKVISDELKQQAEELKDSLRDTLGMKIFEERYREIRERLKKKRENRKREEKVMAVVNPVRNAKRKLRLAAKNRENKRRRTMSFKMARFVR